LcaMap: Simultaneous Identification of Duplications, Losses and Lateral Gene Transfers
Constructing Hyplogenetic Networks from Multiple Phylogenetic Trees
Hybridization Network Construction
ParaRNA: Computing Parametric Alignment of Two RNA Structures
LocRepeat: Finding Regions of Pseudo-periodic Repeats
CTRD: Computing Translocation Distance between Genomes
MotifDetector: Finding motifs in multiple DNA sequences
ParaTree: Parametric Alignment of Trees