chromosomes/
contains in silico chromosomes structures; input folder contains binary contact data.
We disable power-law-conversion by set alpha=1 since the input dataset is binary values.


Command used:
./SuperRec XX.bin -alpha 1 -cutoff_WMDS 1

Helix/
contains insilico helix. input folder contains contacts with different signal coverage (25%,70%,90%): regular25.list  regular70.list  regular90.list

Command used:
./SuperRec regular25.list
./SuperRec regular70.list
./SuperRec regular90.list
